The mocap file itself

I used fraps to show the actual empties as they're meant to move, with the brought in armature. As you can see the file itself isn't great, so for me to use it as the final animation piece is impossible. My video with the red character is very similar to the empties, so I've used the right constraints and made the most of the file.

I will have to grab bits of footage and tie it in to a similar sequence as I'd wanted, it's a real disappointment that I couldn't get the footage I wanted but half the battle is getting the footage into Blender, so I shall still be working hard.